BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C03LP1|AL430192
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1483 0.0
3x_Contig622 279 6e-75
>3x_Contig1503
Length = 10719
Score = 1483 bits (744), Expect = 0.0
Identities = 758/768 (98%)
Strand = Plus / Plus
Query: 170 atattcgaatggtaagcagctaagcaaggrcgagttaaggatattggataacctagaaaa 229
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 15 atattcgaatggtaagcagctaagcaaggacgagttaaggatattggataacctagaaaa 74
Query: 230 gaactacgctttgaaagtgcaagacaaatcgcagaagttcagaatattacagaataatca 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gaactacgctttgaaagtgcaagacaaatcgcagaagttcagaatattacagaataatca 134
Query: 290 tttgaagtttttgaataaagatgatttcaaaccactacccactacgaaatcaagtaacga 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttgaagtttttgaataaagatgatttcaaaccactacccactacgaaatcaagtaacga 194
Query: 350 tacattgatgttgttggrggragaagttgaaggrgatgaagtcaataacatcgactcata 409
||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||
Sbjct: 195 tacattgatgttgttggaggaagaagttgaaggagatgaagtcaataacatcgactcata 254
Query: 410 ttcaaagcagactttacaaaaacagaatcagaagtkacaggataacaatcagcaattttt 469
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 255 ttcaaagcagactttacaaaaacagaatcagaagttacaggataacaatcagcaattttt 314
Query: 470 gcracaaagagatgaggraattacacagttagcgaaaggtgtactcgaagttagtactat 529
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcaacaaagagatgaggaaattacacagttagcgaaaggtgtactcgaagttagtactat 374
Query: 530 tttcagggaaatgcagtctttgatcatagatcaaggtacagtggtcgatagggtcgatta 589
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 375 tttcagggaaatgcagtctttgatcatagatcaaggtacagtggtcgataggatcgatta 434
Query: 590 tgacttagaaaacacggttattgaattaaagcaggcccaaraggagttagacaaggcaac 649
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 435 taacttagaaaacacggttattgaattaaagcaggcccaaaaggagttagacaaggcaac 494
Query: 650 gcactaccaaaaacggagtcaaaaatgtaaaattattctatttctatctttggtcgttct 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gcactaccaaaaacggagtcaaaaatgtaaaattattctatttctatctttggtcgttct 554
Query: 710 agcgttattcctccttgtcatgctgaaacctcatcaccatactatacgagaatcagctcc 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agcgttattcctccttgtcatgctgaaacctcatcaccatactatacgagaatcagctcc 614
Query: 770 ttcaaaatctcacaaacctcctggatcacaagtggaggtcaattctcctaatggagaccc 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttcaaaatctcacaaacctcctggatcacaagtggaggtcaattctcctaatggagaccc 674
Query: 830 gttgctggatccagaaagtaatgtagaataaaaatggtcaaatattaatgaacttgctta 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gttgctggatccagaaagtaatgtagaataaaaatggtcaaatattaatgaacttgctta 734
Query: 890 tgatggagaaactgcatcgaacttcgaaaacaaattttgatatcgtga 937
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tgatggagaaactgcatcgaacttcgaaaacaaattttgatatcgtga 782
>3x_Contig622
Length = 1958
Score = 279 bits (140), Expect = 6e-75
Identities = 147/148 (99%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 1 atcaattgttgctacagttgacgaaactatatcaaaagaactctttaccaggattccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 atcaattgttgctacagttgacgaaactatatcaaaagaactctttaccaggattccagg 1871
Query: 61 acaataagcaggatgaggaggagattgagcagataagtttccaggtaattaagagattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 acaataagcaggatgaggaggagattgagcagataagtttccaggtaattaagagattcc 1931
Query: 121 aagaatgttttggtgttatcaagactct 148
|||||| |||||||||||||||||||||
Sbjct: 1932 aagaat-ttttggtgttatcaagactct 1958
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6972
Number of Sequences: 1807
Number of extensions: 6972
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)